PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU23871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 184aa MW: 20784 Da PI: 8.216 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19 | 2.6e-06 | 17 | 67 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54 + E++RR +++ ++L +ll ++ + +s+K l+ + + +A+ YI +L PHU23871.1 17 KTLEKNRRIKMKLLCSKLFSLLSPPHHHQSTKevLTQQDQVDQAITYIEEL 67 578*******************998777788779**************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence |
MGSSYVISTS AEKLDRKTLE KNRRIKMKLL CSKLFSLLSP PHHHQSTKEV LTQQDQVDQA 60 ITYIEELKEI VEVLKRRKEE LAQGTGDQSK KFMPTTAYTS IKTPMVEVRD LGSTLEVILT 120 CGLQKNFTVQ EVIKIIEEEG AQVVTADYST IGDTIYYTIH AQVKITRLGI DASSVHLRLQ 180 MLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-20 | bHLH family protein |