PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 211aa MW: 23427.9 Da PI: 4.3854 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.2 | 1.1e-08 | 7 | 78 | 59 | 127 |
NAM 59 yfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfy.kg.rapkgektdWvmheyr 127 y ++ ++ +++++++ r+ +g W+ + + +++++ +g++vg ++ ++ kg ++++++ t+W+m ey PHU23839.1 7 YLITPLKNPNKSDQKHARTCGNGAWRGQTSAVPIKNRkGGSVVGYRRNYIYTsKGsKTSSSVTTNWLMSEYF 78 55566666777889999999**************99867888*********954446777889********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MCDKSGYLIT PLKNPNKSDQ KHARTCGNGA WRGQTSAVPI KNRKGGSVVG YRRNYIYTSK 60 GSKTSSSVTT NWLMSEYFVG DDFFKANNIP KQDYALCRIK KHLRGKKDDD DDDAVNMEED 120 DALETIQGML LEPDSTCCTT QEVAEETDQW ESIINEVCDE KIDGVENTTA LVHGEYDLRG 180 CGEIRDVQED GVDGIGSNGI WEAINGILND V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-06 | NAC family protein |