PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 322aa MW: 37089 Da PI: 4.7842 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.1e-19 | 83 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le++F +++++ e++ +LAk+lgL+ rq+ +WFqNrRa++k PHU23831.1 83 KKRRLTDNQVQFLEKCFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWK 136 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 126.1 | 1.6e-40 | 82 | 172 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE++F ee+kLeperKv+la+eLglqprq+a+WFqnrRAR+ktkqlEk+ye L+++yd lk++ ++L ke+e+Lr e+ PHU23831.1 82 EKKRRLTDNQVQFLEKCFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWKTKQLEKEYEELRNRYDDLKSNYNTLLKEKENLRVEV 172 69*************************************************************************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MMARGMLYGG GSNFDQKQRD MYFSTAKEHL GSLFGPDCSS FFGSSSMVSF RGVNGGKRSF 60 FDSFDQEDNE ADELGEYFHQ AEKKRRLTDN QVQFLEKCFG EENKLEPERK VQLAKELGLQ 120 PRQIAIWFQN RRARWKTKQL EKEYEELRNR YDDLKSNYNT LLKEKENLRV EVFQLTDKLL 180 VKEKGNGQLT LCDIQKQSNA SVEVTVADPI SRVELSNVPS RILKQQKQED LSSAKSDVFD 240 SESPHYTDKR HSTFIDQGDS ARVFETEQSD LSQDDDENFG KAMLSTANLL GKVEDDDYPA 300 TSSNMHYFGF PSDDQGFGFW TY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 139 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-40 | HD-ZIP family protein |