PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23649.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 533aa    MW: 59191.7 Da    PI: 7.0711
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.22.1e-1151605321374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfshl 96 
                 lv+lL++cAeav+ +d+++a+ lL++l+  a   g+++qR+a++f+++La rla  +  +++  +++ + ++++   +++  al+l++e++P ++f+h+
  PHU23649.1 160 LVQLLITCAEAVACRDKSRASVLLSELRSSALVFGTSFQRVASCFMQGLADRLALvQPLGMVGYVATPAMNKTDiaLEKKEEALRLLYEMCPHIQFGHF 258
                 689**************************************************9944445665565555555556688899999*************** PP

        GRAS  97 taNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                 +aN+ Ilea+ege+ +H++D+++s    +G QW  L+q+La+Rp+ pp +lRiT+vg+    + e+ + +g+ L+ +A++lg+++ef++ v+++le+l+
  PHU23649.1 259 VANSLILEAFEGESFIHVVDLGMSlglpHGHQWRRLIQSLANRPGHPPrRLRITAVGQ----NIEKFQVIGDELEAYARSLGISLEFSA-VESNLENLK 352
                 ********************99874444678*************877779********....99*************************.79******* PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                 +++++   gE+l+Vn++lqlh +++es    +   +vL++v +lsP+++v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ + +r+k+E+++
  PHU23649.1 353 PKDIKAYDGEVLVVNSILQLHCVVKESRGALN---SVLQVVHELSPRILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDVMLPKYDTKRAKIEQFY 448
                 ************************88877777...8*************************************************************** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  ++ qak  l+kv+  +g+++ ee+g+lvlgW ++p+v++S+W+
  PHU23649.1 449 FAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MVPQAKQWLAKVNgHEGFTITEEKGCLVLGWTSKPIVAASCWK 532
                 ***************************************96..799**********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MINDMANVFL SLEPCNGDQI GYDPLENGLY LRNHKELSYS LNPYTSVLKR SAAGNGMMIS  60
TLSNGSGNFK RLRRTPSLGE SFGSNSTFYS TDSSGGGSNC STLPRNDSTN SVNSLSLQPG  120
LHFRHHVWAL NQRYLAAEAI EEAAAEIINE EEANGEAVKL VQLLITCAEA VACRDKSRAS  180
VLLSELRSSA LVFGTSFQRV ASCFMQGLAD RLALVQPLGM VGYVATPAMN KTDIALEKKE  240
EALRLLYEMC PHIQFGHFVA NSLILEAFEG ESFIHVVDLG MSLGLPHGHQ WRRLIQSLAN  300
RPGHPPRRLR ITAVGQNIEK FQVIGDELEA YARSLGISLE FSAVESNLEN LKPKDIKAYD  360
GEVLVVNSIL QLHCVVKESR GALNSVLQVV HELSPRILVL VEQDSSHNGP FFLGRFMEAL  420
HYYSAIFDSL DVMLPKYDTK RAKIEQFYFA EEIKNIVSCE GPARVERHER VDQWRRRMSR  480
AGFQAAPIKM VPQAKQWLAK VNGHEGFTIT EEKGCLVLGW TSKPIVAASC WKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.13e-77GRAS family protein