PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23203.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 395aa MW: 44593.4 Da PI: 4.2571 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 135 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g PHU23203.1 135 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 184 89*******.**********82....35*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MDYDMLCPIK YTEHRNVIRK VSKPSLIKSK KFPETSKSPQ YNPSVPRTVR ISVTDPDATD 60 SSSDEEEDQL FGRRRVKKYI NEISIEAAPI KCEVSSSTAK NSEKTMVNKR ALEALQVKQK 120 PMKVQTPQST NTVRKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AAMVYDNAAI 180 KLRGPDALTN FITPPKPAPE PEPEPEISVP SHSGYESGNE SRNIPSPTSV LRFRMSQSSE 240 ETDQQSQCPS VQGPMECEQT VQEVVEPFVQ NAEPLESVPQ QEDVEECQGE TSMIPDYSND 300 YLPTDVPFLE NYFNFEVPEQ TLFEDIPTTT TTSYPNNLGS SNNDISSLDF ANDFLFNDDD 360 FANFDDAFQD LGTLGVDDYF QDIVDYSSVD SLLAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-57 | ERF family protein |