PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU23026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 108aa MW: 12201.9 Da PI: 11.4867 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 43 | 91 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+Wv+ +r+p +k+ r++lg+f tae a+a++ +++l+g PHU23026.1 43 YRGVRQRN-SGKWVCKVREP---NKKSRIWLGTFPTAELVARAHDVVALSLRG 91 9****999.7******9998...347*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 108 aa Download sequence |
MSAHSNCSPN RAILSDEDVI LASNNPKRSA ESKKFRETRH PAYRGVRQRN SGKWVCKVRE 60 PNKKSRIWLG TFPTAELVAR AHDVVALSLR GRSACINFAD STWRLARP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51990.1 | 3e-49 | ERF family protein |