PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22349.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 616aa MW: 66538.8 Da PI: 6.6688

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.7e-31	261	318	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk er d++++ei+Y+g+H+h+k PHU22349.1 261 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERPP-DGQITEIVYKGSHDHPK 318 7*************************************9.*************85 PP
2	WRKY	105	3.9e-33	432	490	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct a+Cpv+k+ver+++dpk+v++tYeg+Hnh+ PHU22349.1 432 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNARCPVRKHVERASHDPKAVITTYEGKHNHD 490 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MEDSHSHSHC PRPYSNSAPL SSINETSEQV KFSSSDAALF SSSDAAFVYS SAFGSNSSSR 60 AKYKLMSPAK LPISRSPCIT IPPGLSPSSF LESPVLLSNI KAEPSPTTGS FSKFQLMQGS 120 SGSAAFSLMR NCSSGNAYGE TTGEFEFEFP IGSSSTSGSL AKEAVICAGF NQQQSEPLIQ 180 VQNRCPSQSL APPALVKSEM PNAKELSLPT PVCLDASLIS TAAAATDNEE INQRGQSNPS 240 SHRSSADNKN VSSVTADRSS EDGYNWRKYG QKLVKGSEFP RSYYKCTYPN CEVKKIFERP 300 PDGQITEIVY KGSHDHPKPQ PNHRFTPGAL TSVQEDRGER EACLTGQEDK FNTNAQTSNT 360 EPSGTPLSPQ QADDDGLEGT VSQLHSSNDQ MDEDDSFAKR RKMDGVMDII PVVKPIREPR 420 VVVQTVSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTN ARCPVRKHVE RASHDPKAVI 480 TTYEGKHNHD VPTARTNSHE MAGSAPVTGS SRVRAEENGA ISLDLGVGIG HGMENGRNGQ 540 LHTLPAETVR SQGQVSSSIV MVVQPAAVAA CYSIVNGGMN CFGTIENRVQ GTGFETLPLQ 600 SSAQYPQNYG MILLGP

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MEDSHSHSHC PRPYSNSAPL SSINETSEQV KFSSSDAALF SSSDAAFVYS SAFGSNSSSR  60
AKYKLMSPAK LPISRSPCIT IPPGLSPSSF LESPVLLSNI KAEPSPTTGS FSKFQLMQGS  120
SGSAAFSLMR NCSSGNAYGE TTGEFEFEFP IGSSSTSGSL AKEAVICAGF NQQQSEPLIQ  180
VQNRCPSQSL APPALVKSEM PNAKELSLPT PVCLDASLIS TAAAATDNEE INQRGQSNPS  240
SHRSSADNKN VSSVTADRSS EDGYNWRKYG QKLVKGSEFP RSYYKCTYPN CEVKKIFERP  300
PDGQITEIVY KGSHDHPKPQ PNHRFTPGAL TSVQEDRGER EACLTGQEDK FNTNAQTSNT  360
EPSGTPLSPQ QADDDGLEGT VSQLHSSNDQ MDEDDSFAKR RKMDGVMDII PVVKPIREPR  420
VVVQTVSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTN ARCPVRKHVE RASHDPKAVI  480
TTYEGKHNHD VPTARTNSHE MAGSAPVTGS SRVRAEENGA ISLDLGVGIG HGMENGRNGQ  540
LHTLPAETVR SQGQVSSSIV MVVQPAAVAA CYSIVNGGMN CFGTIENRVQ GTGFETLPLQ  600
SSAQYPQNYG MILLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-154	WRKY family protein