PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22113.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 318aa    MW: 36404.2 Da    PI: 8.8487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-11147199155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++ h  +Er RR+++ +  + Lr+l+P  +   ++K s ++  + Av+YIk+Lq
  PHU22113.1 147 KKVVHRNVERHRRKEMANLVNSLRSLIPIEF--IKGKRSASDHMQVAVDYIKHLQ 199
                 6788*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDNNYLWEIF TNKKQNISED HDNHHHQLLQ IPNFQQNGFS QQDNQDLIED PVGSSVIMSQ  60
LQTSCDQLYK PSTINTSTSI VTPRFQTKCD QLYKSSAAST RSTSINMPGQ FQTSCDRPYK  120
SPVGTKSTNL DRNNKEGLTR NESNKLKKVV HRNVERHRRK EMANLVNSLR SLIPIEFIKG  180
KRSASDHMQV AVDYIKHLQK NIQELDNTRK NIKNIISLDD QNKSSTNITF QKNNICVTVN  240
KCEDGMEILI NVNNSHKEEI FSLSKVLRWL LKEGLNVVSC VDSKQDEWSL IMIQCQVNNI  300
SSGLTLVGLQ KKLIDLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-28bHLH family protein