PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20918.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 381aa MW: 41898.3 Da PI: 4.6017

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	32.4	2.6e-10	44	118	38	128
NAM 38 diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + y ++P++L+ + fF++r+++ + tk+g W+a+g e+++ +++ g ++t+ f + +ap ekt W+++ey++ PHU20918.1 44 NPYLYDPSNLQ-------DGACFFVRRAEE--------KETKHGLWRAKGAACEIVA-NSAISGWRTTFEFSQIQAPIEEKTVWMIQEYKI 118 66777888885.......356777777664........45889************.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MHPLAPSAPP PGFMSSHWTD DKIILSLDQI NRGSPIPDYV IVDNPYLYDP SNLQDGACFF 60 VRRAEEKETK HGLWRAKGAA CEIVANSAIS GWRTTFEFSQ IQAPIEEKTV WMIQEYKITL 120 KGQHDQTKSQ ESALCRVFSC CNETKPEQRD DLDTLDFLSL MSVFELHTSS SDGQRSIGEP 180 QVNSQAEGVV SSLIDKSGDH SDDDCILRGD YLEVNDLVDA ASHSSSSESS SRPSFASDEY 240 FDSMALLRDL DDDEKKEDLN GNGSNGSYNT MTCVLQPAPL ESLVKGGEAA AEETQQAPAI 300 NKSEPPSETS TDQAAKRLKA ERMDEGPSHS CRPTTSSSSS SSSDEPGRVA TRADKRTKKL 360 MKNLFNTVRI ASSRLIWIRA G

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MHPLAPSAPP PGFMSSHWTD DKIILSLDQI NRGSPIPDYV IVDNPYLYDP SNLQDGACFF  60
VRRAEEKETK HGLWRAKGAA CEIVANSAIS GWRTTFEFSQ IQAPIEEKTV WMIQEYKITL  120
KGQHDQTKSQ ESALCRVFSC CNETKPEQRD DLDTLDFLSL MSVFELHTSS SDGQRSIGEP  180
QVNSQAEGVV SSLIDKSGDH SDDDCILRGD YLEVNDLVDA ASHSSSSESS SRPSFASDEY  240
FDSMALLRDL DDDEKKEDLN GNGSNGSYNT MTCVLQPAPL ESLVKGGEAA AEETQQAPAI  300
NKSEPPSETS TDQAAKRLKA ERMDEGPSHS CRPTTSSSSS SSSDEPGRVA TRADKRTKKL  360
MKNLFNTVRI ASSRLIWIRA G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	7e-09	NAC family protein