PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 276aa MW: 30512.9 Da PI: 8.6859 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.6 | 6.9e-19 | 43 | 88 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v+++G ++W++I++++ gR++k+c++rw + PHU20895.1 43 KGPWSAEEDKILTKLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 88 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 56 | 8.9e-18 | 97 | 139 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ PHU20895.1 97 PFSPSEDETILAAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 139 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MQLPPSLGFS FTIIRCSTST SSSSESSSSE STPRNDNKAE KIKGPWSAEE DKILTKLVER 60 YGARNWSLIS KYIKGRSGKS CRLRWCNQLS PNVEHRPFSP SEDETILAAH AKYGNRWATI 120 ARLLPGRTDN AVKNHWNSTL KRRYQQLLQQ QNSGQMVNGL EFRSGSGSGS GSGSGSGMEY 180 MNVDESPKGN TNNYATTMTT MAQCNYTSGV WRNNNNYGGG ECDDPMTTLS LAPPGMAGEE 240 MPERKTESFP AGFWDVMRDV IAKEVREYVA STGFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 1e-56 | MYB family protein |