PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20848.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 307aa MW: 34273.4 Da PI: 8.6417

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.6e-32	123	176	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PHU20848.1 123 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 176 9****************************************************7 PP
2	Myb_DNA-binding	45.9	1.3e-14	124	175	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ PHU20848.1 124 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 175 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MRDTVLSMVP DLSLQISLPP CISKSDQFKE AIRFDSTTDS GSSASVGSDL SHENNGYFHL 60 DKIKPFNLPL VPSYEPTLSL GFGQVPTGTN HQYQHYQPQI YGRDFKRSSR MNISGVKRTA 120 RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKST 180 DKATAKGQGE NVFVNQHKGI NNIGEYEKSG EEIDAVSQSS TMPQNMAHNM RDPSSFMPDQ 240 TNAWSHSNRE RPFANYPHIY SNMGGIETAN NSSSNDTLVN LEFTLGRPSW KMEQAGSSSN 300 DLTLLKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	1e-67	G2-like family protein