PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20606.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 247aa MW: 28217.9 Da PI: 8.8158 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.3 | 2.7e-18 | 121 | 175 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq ++Le+ F+++ +++ +++++LA++l+L rqV vWFqNrRa+ k PHU20606.1 121 RKKLRLTKEQSDVLEDSFKEHTTLNSKQKRDLARRLSLRPRQVEVWFQNRRARTK 175 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.4 | 9.2e-39 | 121 | 209 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+ +LE+sF+e+++L++++K +lar+L l+prqv+vWFqnrRARtk+kq+E+d+e L+++y+ lkeen+rL+ke +eL+ + PHU20606.1 121 RKKLRLTKEQSDVLEDSFKEHTTLNSKQKRDLARRLSLRPRQVEVWFQNRRARTKLKQTEVDCEILRKCYEDLKEENRRLNKEIQELK-S 209 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MICNTRLSLS LGSSTIPPHQ NNKKRKATQD DNNQELALGL STSSELITNN NCDHMINPQL 60 LGGVNSSVSS LSNTSVKRER DASSLEEEVE NLETKKVVLI SPKVLVHNDD DDEDVHVYGT 120 RKKLRLTKEQ SDVLEDSFKE HTTLNSKQKR DLARRLSLRP RQVEVWFQNR RARTKLKQTE 180 VDCEILRKCY EDLKEENRRL NKEIQELKSL KMSAPFRLQL SAATLSMCPS CERSTYGGST 240 NRIFITN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 126 | TRKKLRL |
2 | 170 | 178 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 3e-57 | HD-ZIP family protein |