PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20491.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 585aa MW: 61972.9 Da PI: 9.9744

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	204	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W++I ++ Rt+ q+ rw PHU20491.1 204 RKPWSAAEDRELIAAVQKCGEGNWASILKEDFkGDRTASQLYQRW 248 789************************997444699999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MMEKRKFKRR VFVSEHDMST LLQRYTAMTM LTLLQEVAQV KESKIDWNEL VKKTTTGITN 60 AREYQMVWRH LAYRQVLLDK VDDDAQPLDD DSDLESDLEA FPPVSNETSL EAAACVKVLV 120 ASRAPCDTNM SDGNTIEVPL TISMPNRQTS GTAAENSLHG ISAYGTKLTV PVTVQMQPLP 180 SVTAAEGLDT SGPGTASYNS RRRRKPWSAA EDRELIAAVQ KCGEGNWASI LKEDFKGDRT 240 ASQLYQRWSI IKKRNMAGNA SQLSEAQLAA RHAMSVAFGD NLRAACPTST NVGPNSSGGP 300 SNSSHFAAAD IASGGPQSKH RQDLVPSKPI VPKNPLAEPA INPDPMAKAA AMAASSPIAV 360 HSSAAASLQK AAQSKKGIHI MPGGTPAVKS SVPSSFSGLP SNVHFIRTGL VSRPAGLSNA 420 SQSGTQQLQA LRSASPAVQP RPATVPSRTN TASVVPSAPT SSPATAVLGV KSKAAVMQEN 480 QTAVLSNARS EKAGVIRAAS LANTPQQQVQ KGPTFGSGNR LTVKVEGPEL GGESKASRIW 540 IQEKLIPSQE SPSNKNENTK TELAAENTSG QGPAPVTCKV VFKDS

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MMEKRKFKRR VFVSEHDMST LLQRYTAMTM LTLLQEVAQV KESKIDWNEL VKKTTTGITN  60
AREYQMVWRH LAYRQVLLDK VDDDAQPLDD DSDLESDLEA FPPVSNETSL EAAACVKVLV  120
ASRAPCDTNM SDGNTIEVPL TISMPNRQTS GTAAENSLHG ISAYGTKLTV PVTVQMQPLP  180
SVTAAEGLDT SGPGTASYNS RRRRKPWSAA EDRELIAAVQ KCGEGNWASI LKEDFKGDRT  240
ASQLYQRWSI IKKRNMAGNA SQLSEAQLAA RHAMSVAFGD NLRAACPTST NVGPNSSGGP  300
SNSSHFAAAD IASGGPQSKH RQDLVPSKPI VPKNPLAEPA INPDPMAKAA AMAASSPIAV  360
HSSAAASLQK AAQSKKGIHI MPGGTPAVKS SVPSSFSGLP SNVHFIRTGL VSRPAGLSNA  420
SQSGTQQLQA LRSASPAVQP RPATVPSRTN TASVVPSAPT SSPATAVLGV KSKAAVMQEN  480
QTAVLSNARS EKAGVIRAAS LANTPQQQVQ KGPTFGSGNR LTVKVEGPEL GGESKASRIW  540
IQEKLIPSQE SPSNKNENTK TELAAENTSG QGPAPVTCKV VFKDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-69	MYB_related family protein