PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 29842.9 Da PI: 4.9612 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 21 | 73 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++ +q+++Le+ Fe +++++ +++ ++A++lgL+ rqV +WFqNrRa++k PHU20351.1 21 KRRLRVDQVQALEKIFEVDNKLDPDRKVKIAQELGLQPRQVAIWFQNRRARWK 73 4567889*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 124.3 | 5.5e-40 | 20 | 110 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrl +qv++LE+ Fe ++kL+p+rKv++a+eLglqprqva+WFqnrRAR+ktkqlE dy+ Lk++y+al+++ +++e+e+e L +elk PHU20351.1 20 KKRRLRVDQVQALEKIFEVDNKLDPDRKVKIAQELGLQPRQVAIWFQNRRARWKTKQLEIDYNILKANYEALQHNYSKVEQEKEGLITELK 110 9*************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MLDGLEDEDG IEESGCGTGK KRRLRVDQVQ ALEKIFEVDN KLDPDRKVKI AQELGLQPRQ 60 VAIWFQNRRA RWKTKQLEID YNILKANYEA LQHNYSKVEQ EKEGLITELK GLKEKLGEET 120 ISPAFQRPQE LILNKLKNSS DFVDSKDGSS DSDSSGVMNE ENYTNTTTLN YQQLMPKVSS 180 YNNALDHLSL SSSTYTQLLD HPRASNSTSS SMRGYNNNNG HQQQGVGRME EQNGFTTEDS 240 CNIYSVDQAP NLYWYFSDHR N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 49 | KKRRLRVDQVQALEKIFEVDNKLDPDRKVK |
2 | 68 | 76 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 1e-37 | HD-ZIP family protein |