PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20223.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 586aa MW: 65896.1 Da PI: 4.587

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.4	4.9e-52	34	160	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeelv +yLk+k+ ++++ l ++i+e+d+yk+eP+dLp +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++ +++ PHU20223.1 34 PPGFRFHPTDEELVLYYLKRKICRRRILL-DAIAETDVYKWEPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC-NSR 130 9***********************999.99**********96559999*************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvfykgrap ge+t+Wvmhey++ PHU20223.1 131 AVGVKKTLVFYKGRAPVGERTNWVMHEYTM 160 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MELLLNSSTP SSSSSPPSKE MKTSQYFGEN SVFPPGFRFH PTDEELVLYY LKRKICRRRI 60 LLDAIAETDV YKWEPEDLPD LSKLKTGDRQ WFFFSPRDRK YPNGARSNRA TKHGYWKATG 120 KDRIITCNSR AVGVKKTLVF YKGRAPVGER TNWVMHEYTM DEEELKRCLT AQDYYALYKV 180 FKKSGPGPKN GEQYGALFRE EDWVDDECLN AKVSVQLESP RRQENSTKHI DVVPATDDVL 240 EELLNCIADE PVLPEPVDNN FALGQLVQEE DTESTLLNQS SRGVNLYNHC AATGPSFQQY 300 NARASFDMTQ SGTSQLHLHE APEVSSAPVN HEKPVYVAEE DYLEDFLEMD DLLVPEPSVQ 360 NFDDPGFCIQ NFDHQMPNGQ VFDKPAGNME TLQFNDFDGL TEFDLYHDAP LFLDNAGTPT 420 VGQIAQPYVN NSVNGISYPD SATYMSTSQN GMMNYQQMHL NHENQISNQF WTLDERFDVF 480 NPVEGNKSVV HQASSGVVND NNFANPLGAN QNLAKKDDGT QSWFSSNLWA FVDSIPTTPA 540 SAAESALVVN KAFERMSSFS RMKLNVGDMN VAAGTSAKIV GGYISS

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MELLLNSSTP SSSSSPPSKE MKTSQYFGEN SVFPPGFRFH PTDEELVLYY LKRKICRRRI  60
LLDAIAETDV YKWEPEDLPD LSKLKTGDRQ WFFFSPRDRK YPNGARSNRA TKHGYWKATG  120
KDRIITCNSR AVGVKKTLVF YKGRAPVGER TNWVMHEYTM DEEELKRCLT AQDYYALYKV  180
FKKSGPGPKN GEQYGALFRE EDWVDDECLN AKVSVQLESP RRQENSTKHI DVVPATDDVL  240
EELLNCIADE PVLPEPVDNN FALGQLVQEE DTESTLLNQS SRGVNLYNHC AATGPSFQQY  300
NARASFDMTQ SGTSQLHLHE APEVSSAPVN HEKPVYVAEE DYLEDFLEMD DLLVPEPSVQ  360
NFDDPGFCIQ NFDHQMPNGQ VFDKPAGNME TLQFNDFDGL TEFDLYHDAP LFLDNAGTPT  420
VGQIAQPYVN NSVNGISYPD SATYMSTSQN GMMNYQQMHL NHENQISNQF WTLDERFDVF  480
NPVEGNKSVV HQASSGVVND NNFANPLGAN QNLAKKDDGT QSWFSSNLWA FVDSIPTTPA  540
SAAESALVVN KAFERMSSFS RMKLNVGDMN VAAGTSAKIV GGYISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-123	NAC family protein