PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU19605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26952.8 Da PI: 5.2662 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.3e-17 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++a ++l+g PHU19605.1 39 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAGLLCLKG 88 8*****998.**********9...336********************9999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
MVKTEQKSLA EPSKTSMSLS SSSSTSSSNN NNMKMKKNKY KGVRMRSWGS WVSEIRAPNQ 60 KTRIWLGSYS TPEAAARAYD AGLLCLKGPS ASHNLNFPFD SSFYHHIDHT STTLSPKAIQ 120 RVAAAAAATA EGGGNQNIGS VSLFDDTNLI LSSPSPPLSS KSTSSSSPLS HADQFDDVCL 180 LQNYSTAATT ATFDQEITAV SMIEQWYNFD SPKYNDMLDG TVFFDPPSME DIYYEEGSAD 240 IPLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G21910.1 | 5e-39 | ERF family protein |