PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 18055.5 Da PI: 6.9605 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 14 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp + +++lg+f+ta eAa ++ + +++g PHU19054.1 14 HYRGVRKRP-WGRYEAEIRDP-----HrkCQVWLGTFDTAMEAAMVYDTTAIEFRG 63 7********.**********6.....336*********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MAAAAATAAE KEVHYRGVRK RPWGRYEAEI RDPHRKCQVW LGTFDTAMEA AMVYDTTAIE 60 FRGVKVKTNF PIHIDVTRSP SEVSIVESST TRVKVKKVEV PEELVIVESS PLPLDLTLGR 120 SSYYIGRDLS ESDSSSVIDF MGNDTKDIQI HLNFPSVPKN K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 4e-31 | ERF family protein |