PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21707.2 Da PI: 10.7572 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.5 | 3.3e-08 | 101 | 150 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ + ++ A rdp+ + ++ lg+f+t ee a+a++ + +++g PHU19046.1 101 HYRGVRKRP-SAKYTAATRDPR----KiCNVLLGTFDTTEEGAQAYDTMSIEFRG 150 6********.7******9**83....359******************99888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MRNDWLATGK CTYIILKTIT NSGPGVTGKV AVMLPRGHGF KPWKQPLTEM QGPKKRKNRK 60 GATRVENVDG GVAKAAAREV KVNGGVAKAE EKVKGVAEEV HYRGVRKRPS AKYTAATRDP 120 RKICNVLLGT FDTTEEGAQA YDTMSIEFRG VKVKTNFLNL MDKMNRTPSQ VSTVESLNVM 180 AVVAIQPSPL PLPPPQPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 3e-21 | ERF family protein |