PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17697.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 481aa MW: 53413.2 Da PI: 6.8108

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	85	102	2	19
EETTTTEEESSHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrH 19 +C++Cgk Fs++ ++ H PHU17697.1 85 VCENCGKEFSSWKSFLEH 102 6**************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MACIDQEQQQ PIFKHYCRVC KKGFVCGRAL GGHMRAHGIG DEGANIDDDD PASDWEDKFG 60 GSVKGGNKRM YQLRTNPNRQ KSNRVCENCG KEFSSWKSFL EHGKCSSEDA ESLVSSPGSE 120 GEDYINNGGR KGYGWSKRKR SLRTKIGTIS TSTYPPSEDE DLVLAKCLID LANAKVIDMS 180 LAEPEESCAS ASKEEERARN PMNYLTPLVS TRVPFDNKAK GVSNKGLFEC KACKKVFNSH 240 QALGGHRASH KKVKGCYAAK QDQLDDSLID DQDMNITQDE FTLQGSKSMK KSKIHECSIC 300 HRVFSTGQAL GGHKRCHWIT SNSPDSTSKF NFHGHMEQIN LRSNLRKLGD ALDLNIPISH 360 EDMSRIRRDP MNPLSFEVST EIHLHPWSIN AHEAKDGENH SCSDNYYLDE NINNNNNTND 420 NGNNGNNING TIQSGEDDEA DSSKLKLAKL SELKDMNKNS ENPSHWLQVG IGPTTEVGAN 480 P

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MACIDQEQQQ PIFKHYCRVC KKGFVCGRAL GGHMRAHGIG DEGANIDDDD PASDWEDKFG  60
GSVKGGNKRM YQLRTNPNRQ KSNRVCENCG KEFSSWKSFL EHGKCSSEDA ESLVSSPGSE  120
GEDYINNGGR KGYGWSKRKR SLRTKIGTIS TSTYPPSEDE DLVLAKCLID LANAKVIDMS  180
LAEPEESCAS ASKEEERARN PMNYLTPLVS TRVPFDNKAK GVSNKGLFEC KACKKVFNSH  240
QALGGHRASH KKVKGCYAAK QDQLDDSLID DQDMNITQDE FTLQGSKSMK KSKIHECSIC  300
HRVFSTGQAL GGHKRCHWIT SNSPDSTSKF NFHGHMEQIN LRSNLRKLGD ALDLNIPISH  360
EDMSRIRRDP MNPLSFEVST EIHLHPWSIN AHEAKDGENH SCSDNYYLDE NINNNNNTND  420
NGNNGNNING TIQSGEDDEA DSSKLKLAKL SELKDMNKNS ENPSHWLQVG IGPTTEVGAN  480
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	4e-26	C2H2 family protein