PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17627.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 270aa MW: 30530.6 Da PI: 9.8032

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36	1.6e-11	2	40	10	48
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++lv+++k++G g+W++ ++ g+ R++k+c++rw +yl PHU17627.1 2 KKLVEYIKKHGHGSWHSLPHLAGLARCGKSCRLRWTNYL 40 79***********************************97 PP
2	Myb_DNA-binding	36	1.6e-11	46	91	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ e ++ ++++ +lG++ W++Ia+ ++ gRt++++k+ w+++l PHU17627.1 46 RGPFSHEVEKFVIQLHGMLGNR-WAAIASQLP-GRTDNEIKNLWNTHL 91 79999999999*********.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MKKLVEYIKK HGHGSWHSLP HLAGLARCGK SCRLRWTNYL RPDIKRGPFS HEVEKFVIQL 60 HGMLGNRWAA IASQLPGRTD NEIKNLWNTH LKKRLLSMGI NPQTHEPSSA PNGLLVTPLT 120 SLAARHMAQW ESARLEAEAH LSRESQLLVP SSVESSGTDY FLRIWNSEVG EAFRKFNKKK 180 AGLVKVQPLK HLHQQNTKWK NGQPYKGDVF QGYDDTSSSS GLEDSSESAL QLPFDFLSNN 240 DMSFLRHSDT YSLYPGFLSE SSLKCSSTEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-90	MYB family protein