PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16907.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 393aa    MW: 43972.2 Da    PI: 6.7471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-21155204255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa+a+++a++k++g
  PHU16907.1 155 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTAEDAARAYDEAALKFRG 204
                 7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MCIFKVANHR KKGDYKPITI RNDDEDHEGG MINNNVMFSG NINREEEMSV MVSALTRVIT  60
GEDRILNQEN NNSDNIIIGS SSLNEFSGGV GEKRGREEHQ YFLSDISSSS GGEDSSNSKT  120
IASNTPTKES TFIYITPTYD HNTTNIIDYN QPRRRYRGVR QRPWGKWAAE IRDPYKATRV  180
WLGTFDTAED AARAYDEAAL KFRGSKAKLN FPENVRLLPT SSTPRQNHVG NTRYPMEKQF  240
LAGTFPKDPM ENNNNNVEFL TDTFPKNSMG NTHVSSIVSP DDSPNTLSTM SFFPSSNPIV  300
HTQLPNSNIN PLFFLNDDFQ MVHSSSSLLN QSMFSTTFQY SSSSSSSSSS SSRVPFVPNM  360
YFHGGSQRTS QSSECDFRAT SSDSAHHPSS SSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.14e-24ERF family protein