PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16627.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 264aa    MW: 30520.8 Da    PI: 4.6619
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.51.1e-1418158128
         NAM  58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.............kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +yfF+ +++k+ tg+r +r+t +g+Wka+   k++ ++             ++ ++g+k++Lv++   ++k++kt+W+m eyr+
  PHU16627.1   1 MYFFTLSRRKNDTGTRLERKTPKGVWKASQARKNLSNNekfgnirnkdvtgDDVQIGTKTSLVYW---ESKTTKTSWLMSEYRF 81 
                 5******************************999999777777766666555555**********...566689********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MYFFTLSRRK NDTGTRLERK TPKGVWKASQ ARKNLSNNEK FGNIRNKDVT GDDVQIGTKT  60
SLVYWESKTT KTSWLMSEYR FPDELHHQTV SNEIKDKSFE LTLNVIYYNG TKKNNDDDHD  120
KGKEIVEYCN DLIPQPNPIN FDHDIATTST MQPSFHQTPT QSYTDAAATT STRQQSFPQP  180
LCGVMENVDN DFLQFDDDIS CPIPNIDFLE FDPFDQSISQ YFDFDNFPCI KDEDIISHIP  240
ISQDDQTPSS DIKDPQLQMK KIKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.15e-09NAC family protein