PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16555.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 360aa    MW: 40203.4 Da    PI: 6.3993
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79e-1813104199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkvl    +l  + l++p +fa++ ++   ++++  led++gr+W+ ++  +k++gr  +++GW eF +++gLk g fvvF+++  s++++ v++f +
  PHU16555.1  13 FFKVL--IEALCFQVLYIPSTFARSVSHL--TDQETYLEDSNGRRWRARV--CKHDGRLAIKQGWPEFSSEHGLKLGNFVVFRYVP-SSQHFIVQIFGT 104
                 66666..444444669*********9766..4568***************..*******************************996.555569999976 PP
2B335.32.1e-112803501687
                 EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3  16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 l lp +  +++ + +k++ + + l+ ++ r+W+  +    ks+  vlt GWk+F +  gL+ gD +vF+l+++
  PHU16555.1 280 LELPESWPKHFlERSKKGRMIIFLRGPDKRKWTAFY--HSKSCFDVLTYGWKQFTEIYGLNPGDDCVFQLVNQ 350
                 555555553335445567899***************..99999*9************************9864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEACHDEKRV LCFFKVLIEA LCFQVLYIPS TFARSVSHLT DQETYLEDSN GRRWRARVCK  60
HDGRLAIKQG WPEFSSEHGL KLGNFVVFRY VPSSQHFIVQ IFGTSGCEKI RFCSDKGEKV  120
ARAYLEATPP LLQTTSGKAE SEKATDIDAG TGKGKAAICV DESFGMIDRD AQNDQEDGRL  180
CLDLTSFELP ASKPLAQGTS SCDNGKGKRR ASTSPEEIRT SPLGPKDKKF KEASQFDSGE  240
ECANNIEEVI NSEPSDSGGA PSSNADIVSC LVKVDGRDFL ELPESWPKHF LERSKKGRMI  300
IFLRGPDKRK WTAFYHSKSC FDVLTYGWKQ FTEIYGLNPG DDCVFQLVNQ PGCIVDVYKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-09B3 family protein