PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU16102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 380aa MW: 41986.7 Da PI: 9.9811 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.1e-08 | 281 | 330 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ PHU16102.1 281 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 330 678999********************9988889**************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 380 aa Download sequence |
MHVYYNRNID YKHQRSQRDF PFKKRKVFKC GSLSNSDKEM STDGICSSPT DDLHGIACSS 60 SKASSGGCTA AGTSVFNGGR AILRPGDSHV KFRIKSFRVP ELFVDIPENA TIGSLKALME 120 AVTAILGGGL RIGVVFQGKK VRDDNKTLLQ TGISHDYKLD ALGFSLEPNP VQTSQPLGAD 180 CRSCVLPYET PQPLTSRCPS PGTVVHTGIQ QGRSDDHTGT SLSNFLESDH DSAPSPHYAA 240 LEKISANSRA LVPLTAVNAE ALSVVPLRKP KRSEATQRRI RRPFSVAEVE ALVQAVEKLG 300 TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL LDRVLTAHAY 360 WSQQQAKQQM KQPSETYLLL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 17 | 26 | QRDFPFKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-109 | MYB_related family protein |