PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15887.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 304aa    MW: 33800.4 Da    PI: 7.4997
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.22.3e-403798263
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                +e+a+kcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  PHU15887.1 37 PEQAIKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 98
                6899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDPSSAQHHH QELSSQTLES MLVSTKPQQD QKKPKPPEQA IKCPRCDSSN TKFCYYNNYS  60
LSQPRYFCKS CRRYWTKGGT LRNVPVGGGC RKNKRSSSSS RSSSQEQHSI NIPNCPTNPF  120
SYDSSDLSLA FARLQRQESG PLGFENHSNI SMIMCNENPS GFLDALKGST GFLENNNPNG  180
FHHQNLFYGV GNIINGDMGL HNVENGGMGV INNNVSDQEM GLMHNYDQEI SSGTVTTTTA  240
TTMTTVKQEM CNMARDQGDN KVLWGFPWQI NGEGNNMSDF DSTRRMWNGV GGSSWHGLLN  300
SPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.12e-37Dof family protein