PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15852.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 262aa    MW: 29557.5 Da    PI: 8.8002
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.31.2e-19174208135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +l
  PHU15852.1 174 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGRL 208
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MVEQNYWDGT PMGPIVDEDF ENILNGLDLP MESLEEAGLD KDWDDSVYQL FGPIPSDALM  60
TLPLDTVNGC LDAHMTNAPN EFPEAQGNVL FQRRSPISVL ENSRSCSGGR NAPFNFGTKG  120
RRSKRVRSST LSPWILMPPL PRTTFAAKKN SDAKRVKERR KLSGAMASSL FRRCTHCEVT  180
KTPQWREGPL GPKTLCNACG VRYRSGRLLP EYRPAASPTF IPSLHSNSHR KVVEMRRKTV  240
ESSPQWDSQN FVPLNNYMFD TY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-57GATA family protein