PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15692.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 449aa MW: 49123.9 Da PI: 5.1632

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.5	7.7e-11	386	431	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L A +YIk+L+ PHU15692.1 386 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDFAADYIKELE 431 689*******************7....688*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDHRGHQKQQ MTSGLTRYRS APSSCFTSLL SSNNPAGVAG GGGNCGYARD DFDQFLNPRG 60 SNNGIKQVFD RFVANIGPQD SNPDGLMSDS QQINQNPMSN MNVRSDVVAP MKQEHDAQHQ 120 QPMNSQFIAP VKQEITQQSS DYSLASQMNY QTQAQQNQNA TDFSLAMDSF CRYLDSVDTN 180 RCNQTEMDGG FGVGTSNPNL TRYNSSPAGF FAQVNIENEY GALRGIGSYG TGSGSNAAAE 240 QASFSNPSRF SSQKSGQPNS SGLLAPISEL GAKSIEESRQ SDEGFGKGHK NDESYMTGFP 300 MPSWDNSQIL TDDYLQVPED DEAGPFTNVN ASDNQSSEGR ACPPTLLSHL SLPQTSAELS 360 AMEKLLEDSV PCKVRAKRGC ATHPRSIAER VRRTRISERM RKLQELVPNM DKQTNTADML 420 DFAADYIKEL ETQVKALSET RSKCTCSHK

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDHRGHQKQQ MTSGLTRYRS APSSCFTSLL SSNNPAGVAG GGGNCGYARD DFDQFLNPRG  60
SNNGIKQVFD RFVANIGPQD SNPDGLMSDS QQINQNPMSN MNVRSDVVAP MKQEHDAQHQ  120
QPMNSQFIAP VKQEITQQSS DYSLASQMNY QTQAQQNQNA TDFSLAMDSF CRYLDSVDTN  180
RCNQTEMDGG FGVGTSNPNL TRYNSSPAGF FAQVNIENEY GALRGIGSYG TGSGSNAAAE  240
QASFSNPSRF SSQKSGQPNS SGLLAPISEL GAKSIEESRQ SDEGFGKGHK NDESYMTGFP  300
MPSWDNSQIL TDDYLQVPED DEAGPFTNVN ASDNQSSEGR ACPPTLLSHL SLPQTSAELS  360
AMEKLLEDSV PCKVRAKRGC ATHPRSIAER VRRTRISERM RKLQELVPNM DKQTNTADML  420
DFAADYIKEL ETQVKALSET RSKCTCSHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	1e-57	bHLH family protein