PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14911.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 310aa MW: 33249.4 Da PI: 6.9725

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123	3.2e-38	37	132	4	69
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............................ssss 69 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+i+++tgt ++++ PHU14911.1 37 VKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSIIAATGTappsksaplfihggattmlgfhhqlpgstfGQDP 132 5899**********************************************************5554444444444444444444333333331111 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MEFRDSHNEN QDGGSSNNNN NTNNNDSNNK ALSTVVVKKP SKDRHTKVDG RGRRIRMPAL 60 CAARVFQLTR ELGHKSDGET IEWLLQQAEP SIIAATGTAP PSKSAPLFIH GGATTMLGFH 120 HQLPGSTFGQ DPDENFMKKR YKEDTAGAGA TSPSSSSAKP ERTGVQGTEP DQESKPGSSS 180 YIPAPAMWAV GPAAGNVGNT FWMLPGTSST MQRIGGFELP GGGRFSPVQL GSMFLQQPQP 240 VQQLGLGVTE TNMGMLASMN AYNNNNNNNS SSSRGSGIDL GMNLEQHHHH HQNQPQNSDS 300 GDENHKDSQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	6e-43	TCP family protein