PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU14791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 167aa MW: 19079.6 Da PI: 6.6856 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 40.2 | 4.4e-13 | 2 | 50 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k+ie k r +fskRr+g+ KKA+EL d+++ +i+fs+ gk + + PHU14791.1 2 KKIEKKEDRFASFSKRRAGLYKKASELVAEFDVDIGIIMFSPGGKPHSF 50 689*****************************************98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MKKIEKKEDR FASFSKRRAG LYKKASELVA EFDVDIGIIM FSPGGKPHSF FHPTVDAIVS 60 RFQNPDVQLS ESTHLVAAYA RKTVNQLESR LEEFDIREKA AITLTNQLDQ MAKSRQKGWW 120 ESIEQLNADE VAKFEAWLNA TTFNMHHRLN QLENEATISL GCESFGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04100.1 | 9e-22 | M-type_MADS family protein |