PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU14743.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 202aa    MW: 22716.9 Da    PI: 4.9529
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU14743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79.2e-053355123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PHU14743.1 33 YTCTFCRREFRSAQALGGHMNVH 55
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MWNPKDDDDS WEVRAFEEDT GNAMGATWPP RFYTCTFCRR EFRSAQALGG HMNVHRRDRV  60
RLNQPPSFAS NSSLTFPNNV NSNFLVQNQE FIPNGELCLV YSMPNYNPNA IFNPTTIKSS  120
VDPSNLLSNI SPFLTNNLLS PCIPPSSNFQ PNNINSSSFN TSEPSASNSN SNDNNHDKRD  180
SIIGDDIDLE LRLGWRSATP PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-31C2H2 family protein