PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13827.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 270aa    MW: 30009.2 Da    PI: 10.2352
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08165214147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
       PHU13827.1 165 RRPFSVSEVEALVQAVEKLGTGRWRDVKMRAFdnaKHRTYVDLKDKWKTL 214
                      678999********************9776668**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEAVTAILGG GLRIGVVFQG KKVRDDNKTL FQAGISHEDK LDALGFTLEP SPSRASPPLA  60
PEGRSRVLPC ETAQPLTRCS PAPTVIRNGI QQGTYNGFTD HPRTNLSNFI DSDHDSAPSP  120
PDAFLEKNAA DSRALVPVAA VDAEALAMVP MRKPKRSETA QRRIRRPFSV SEVEALVQAV  180
EKLGTGRWRD VKMRAFDNAK HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLI  240
VHAYWSQQQA RQQMKHHSET RLLLSDGCKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.13e-89MYB_related family protein