PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU12733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29931.5 Da PI: 9.9819 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.8 | 2.6e-10 | 99 | 146 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++ + +++Lr l+P+ +K s ++ Le+ v+Y+k+L PHU12733.1 99 RRDVERQRRRDMAKLYQRLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 146 5689*********************77...9******************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MDDSEFDFGQ LDQLFNFLSS LPPPPTPPTT FQNQDSSISL QTQNSNHVPK KKPIVTNHHH 60 HHHVIKKKPI KISNINNDDQ VQNPPKEKEK IAEKKKVLRR DVERQRRRDM AKLYQRLRLL 120 IPSKYLMGKR SISDHLEQIV DYVKDLRKDI EDLERKREAL KQLKSTICSS QLAPSSSSMK 180 LNDDNEDRII VKSCNEGVEI CIKGELSLSK VLKVVLKEGF IVSSCVSSTV DQSLFHIIQS 240 KMNTRGDIDL AVLRSKLMSL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G62975.1 | 5e-15 | bHLH family protein |