PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 27447.4 Da PI: 9.7985 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79 | 1.1e-24 | 44 | 165 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 GfrFhPtd el+ +yL v +k+++ i d+y++ Pwd+ k ++++ +yfF++ +kk + ++r r++ +g Wk++ k k+v+s+kg+ g PHU12727.1 44 EGFRFHPTDRELM-KYLILFVISKPFSKLVPIVLEDLYTIGPWDIF-K-GKKDRALYFFTELKKKRTGNTRYVRSVGEGSWKSQDKGKAVCSEKGSILG 139 7************.9**********9997779999**********6.3.3567899******************************************* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 k++L + + p + +W+m+ey++ PHU12727.1 140 YKRSLRYQNPGLPL-HDGQWLMKEYSI 165 *******9655555.799*******86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MSLARRHPFK QPRTIPSTSY LPTTSYQTRM EYNKEVQENS AHTEGFRFHP TDRELMKYLI 60 LFVISKPFSK LVPIVLEDLY TIGPWDIFKG KKDRALYFFT ELKKKRTGNT RYVRSVGEGS 120 WKSQDKGKAV CSEKGSILGY KRSLRYQNPG LPLHDGQWLM KEYSICDDIK KHLRQRFHEY 180 NKEHYVLCRV KRKIGKDEDG IAPKETIIDE EINDIIGSND AADTLAIDIN RPFHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 1e-23 | NAC family protein |