PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 22680.6 Da PI: 8.823 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 8.1e-21 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAaka++aa++ ++g PHU12386.1 24 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAARDFRG 73 6********.**********8...557**********************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MALKNKVSSN GSENAKVNGV KEVHYRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA 60 AKAYDAAARD FRGPKAKTNF PSPFPLETLN QSPSNSSTLE SSSGETGVHA PMEVDLTRRL 120 GAVAPVFHQQ PTVAVLPNGQ PVLLFDSLWR PGVVVDKAQL SYQVAPMAIE FTGAAGGVSS 180 VSDSSSVVEE NQYVGKKGLD LDLNLAPPME I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 9e-29 | ERF family protein |