PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12326.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 422aa    MW: 47457.5 Da    PI: 5.1345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-19189238255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+g
  PHU12326.1 189 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAAMAYDREAYKLRG 238
                 59******9.**********965...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MAAPEDSGKS MMAMAEEHID FDDNTFERQQ RRPVFEEASM SNRRFKKIKS PERHAYSQSS  60
VPQSPSQSSV TYNNPTSMAF PPPPSSSRLV FPFAYDGTQQ SNATPMFHPQ QQNQQQMISF  120
SPPQCLYPPY FAGELGPSQN QQQLLQYWNE TLNLSPRGRM MMMSRLGQDS RGYFRPQQLQ  180
VQPISATKLY RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEDAAMAYD REAYKLRGDN  240
AKLNFPELFI GKDRGEASTA TNSSPSSPIT PHESSLPQQI SESVELQPIN NELLPPPLPP  300
PPQPPPEGDN HDEESGIGSS EVTTSENLES FGVMEGSASS SQSSELVWGD MAEAWFNAIP  360
AGWGPGSPVW DDLDANNNLM FPPNLHFGNF HQPEPHNPDP HQHHDNTNRD PSSPSCPMRP  420
FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.18e-52ERF family protein