PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 211aa MW: 24258.7 Da PI: 10.1163 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.5 | 2.3e-18 | 80 | 134 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Le+ F+ + ++ +++eLA+kl+L+ rqV vWFqNrRa+ k PHU12308.1 80 RKKLRLTKEQSTLLEDSFKLHTTLAMGQKQELAAKLKLKPRQVEVWFQNRRARTK 134 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 114.4 | 6.7e-37 | 80 | 168 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLE+sF+ +++L +K+ela +L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+ en+rL+ke +eLr+ PHU12308.1 80 RKKLRLTKEQSTLLEDSFKLHTTLAMGQKQELAAKLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKKWCQSLNGENNRLKKELQELRS 168 69*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGNDDNEACD TRLTLGLATS DHHILPKQNQ DNHKKITCQN LSIIPLHSSH DGTDKIDGSS 60 SKTCKNYTKF NNESKKIGMR KKLRLTKEQS TLLEDSFKLH TTLAMGQKQE LAAKLKLKPR 120 QVEVWFQNRR ARTKLKQTEV DCEFLKKWCQ SLNGENNRLK KELQELRSIK IDQRIHLQLS 180 KARTLALCSS CRKISRGDTD EKHETGTESG W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 137 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 5e-45 | HD-ZIP family protein |