PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 133aa MW: 14820.5 Da PI: 4.4679 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30 | 1.2e-09 | 50 | 91 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + ++++E+ l+++ +++ G + W++Ia +++ gR++ ++ +w PHU12214.1 50 LEFSEDEEILIAKMFNLVGER-WSLIAGRIP-GRSADEIEKYWK 91 579******************.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MADCDRSSTS DNASVVSAEF EQKLLSSRES TIDPPAVTAL ETTNKETSEL EFSEDEEILI 60 AKMFNLVGER WSLIAGRIPG RSADEIEKYW KLRIYSKSQG ESMSEILLKS KDQSQTIALK 120 EESGHSTENV KGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 1e-14 | MYB_related family protein |