PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU11987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 250aa MW: 28583.9 Da PI: 6.7117 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.5 | 1.1e-31 | 27 | 79 | 2 | 54 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWtpeLHe F+eav+ LGG +kAtPk+i ++m+vkgLt++hvkSHLQ+YR PHU11987.1 27 PRLRWTPELHELFIEAVQLLGGGHKATPKRIQQMMEVKGLTISHVKSHLQMYR 79 8**************************************************** PP | |||||||
2 | Myb_DNA-binding | 61.5 | 1.7e-19 | 28 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++el+++av++lGgg t+k+I ++m kg+t ++ks++q+y+ PHU11987.1 28 RLRWTPELHELFIEAVQLLGGGhkaTPKRIQQMMEvKGLTISHVKSHLQMYR 79 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MMEYFSMMKK RSSNKIGVRQ YKKSSVPRLR WTPELHELFI EAVQLLGGGH KATPKRIQQM 60 MEVKGLTISH VKSHLQMYRN LKERASPNIV SSVNNFLEER PQFSWSSPRH VCETLEHRPS 120 KSSNQINPGS DQSPYKARVD AHSDQIAENN IYCCDYQEAQ GSLSSGMTKE EEESGGPTSE 180 ICEFPEADGD YKRENNIWPL DDWVARCTKG SAEYSQSDSS TKFLDQQVLQ SPKDNSHINL 240 DLSISSYFYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02060.1 | 3e-28 | G2-like family protein |