PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU10545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 206aa MW: 24285.5 Da PI: 8.7545 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.7 | 2.8e-10 | 105 | 186 | 10 | 93 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 + k++ l++p + +++++++ + +t++d+ gr++e k + + k+gr++lt+GW++ + n ++ D ++ ++++ +++l+ PHU10545.1 105 AKKRDHLYIPVDVVRDYNLE--IPSRMTIRDPAGREFEAKRKDW-KDGRIWLTGGWRNLCWWNLVEKDDRCICEFMRGkGKKSLY 186 568899***********888..55579999***********655.55799*******************9999988664555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSPTDIAMME KALVKIDDPT CSKRRRVYEE EEETEEDEEE EEEDCEEENE RAGTSKKKAS 60 RSKAGCKRAT TRKMRDIPDL YGADIFKNGR ATQPKNPYFV AKIRAKKRDH LYIPVDVVRD 120 YNLEIPSRMT IRDPAGREFE AKRKDWKDGR IWLTGGWRNL CWWNLVEKDD RCICEFMRGK 180 GKKSLYLQVQ VVYEGSVSNR NNKYKK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 27 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60140.1 | 2e-12 | B3 family protein |