PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10252.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 142aa    MW: 15907.7 Da    PI: 7.9628
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.94.4e-1055116161
        FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtg 61 
                 +fY e+Ak +GFs+r+++++ +    +  t+r fvC + g++  +  +++k +r+r+++r++
  PHU10252.1  55 EFYAEFAKGCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKAANDNKPQRNRKSSRCE 116
                 6**************9998877356667999*************999989999999999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MMEIYGDTSD QRSLSLDDTS STEESPDQTR LSLETTNETV PYIGLRFHNH DAAYEFYAEF  60
AKGCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPVKA ANDNKPQRNR KSSRCELGVA  120
GKVTIICDLE ITGSNRESNL LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.18e-58FAR1 family protein