PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09913.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 157aa    MW: 17819.3 Da    PI: 6.7034
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.41.4e-161259249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i   + r vtfskRr+g++KK + L  L+d +v  ++fs+tgkly+y
  PHU09913.1 12 KITKPTYRMVTFSKRRKGLFKKSQKLESLTDSRVVSVVFSPTGKLYTY 59
                6777899****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MGTGKKKIEI KKITKPTYRM VTFSKRRKGL FKKSQKLESL TDSRVVSVVF SPTGKLYTYG  60
DVDYAIEKYY SGNSSTSAAV PSIPVLDYMD YYSCSEVPST SSLMTPRRDG FRDWVESIDV  120
DECENLNRLL MLKEQLEGSI EKIVSNEDSE SFEALFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-12MIKC_MADS family protein