PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU09831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 650aa MW: 74043.5 Da PI: 8.6413 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 462 | 503 | 2 | 40 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W++eE +ll ++v ++++g +W+ I++++g+ Rt +++ PHU09831.1 462 KPWSKEEVDLLRKGVLKYPKGtsrRWEVISEYIGTARTVEEI 503 69********************************99998775 PP | |||||||
2 | Myb_DNA-binding | 28.3 | 4.1e-09 | 594 | 637 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ ++ lv+a k ++++ +W+++a ++ g+t +qck ++ PHU09831.1 594 WSAVQEKALVQALKTFPKEtsqRWERVATAVP-GKTVNQCKKKFA 637 ********************************.********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 650 aa Download sequence |
MASKSSVRLI SYSEEIINGE PIYISSNCCP IKANKYEPAG LAFHSAALRL LGHVEKEDPE 60 DGKEDVPNDK EQPFMYSSES YSSKGKKKSS TGEKIQDHYA LLGLSHLRYL ASEDQIRKSY 120 RDAALRHHPD KLASLLLAEE TEAAKQAKKE EIENHFKAIQ EAYEVLIDPV RRRIYDSTDE 180 FDDEIPTECA PQDFFKVFGP AFLRNGRWSV TQPLPSLGDE NTPIKEVDSF YNFWYSFKSW 240 REFPHADEFD LEQAESRDHK RWMERQNAKL SEKARKEESA RIRTLVDNAY RRDPRILGRK 300 EAEKAEKQRK KEAKILAKKL QEEEAARIVE EEKRKKEEEE KKAAEVASQQ KKLKEKEKKL 360 LRKERSRLRT LAAPVLSQHL LGLTDDDVEG VCMSLDIEQM RNLCDKLDGK GELVKAELLR 420 EALGQKHNSK YENKDENSKS QQNGSLEDKI QVSLMSSEKR EKPWSKEEVD LLRKGVLKYP 480 KGTSRRWEVI SEYIGTARTV EEILKATKTV LLQKPDSAKA FDSFLEKRKP APTIASPLST 540 RAEVEGVDNS SKPESGSAKL ANSQESLSQN TNSQKTEDAP AANGVSSSSD SDIWSAVQEK 600 ALVQALKTFP KETSQRWERV ATAVPGKTVN QCKKKFALLK ENFRNKKSAV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 333 | 356 | KRKKEEEEKKAAEVASQQKKLKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |