PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU09761.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 244aa MW: 27772.9 Da PI: 5.2294

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU09761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	4.9e-19	43	94	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ft+eq++ Le+ Fe + ++ +++ +LA++lgL+ rqV +WFqN+Ra++k PHU09761.1 43 RRFTDEQIKSLETIFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 94 48*************************************************9 PP
2	HD-ZIP_I/II	124.3	5.6e-40	42	132	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 rr+++eq+k+LE+ Fe+e+kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE+dy++Lk++yd+l+++ e+L+ke+++L +l++ PHU09761.1 42 ARRFTDEQIKSLETIFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSTLKSNYDNLASQYESLKKEKQSLLIQLQK 132 69***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MFDVGEFSPT SSAALSAECF SSSSCFSSPS SSKKKKINSN NARRFTDEQI KSLETIFETE 60 TKLEPRKKLQ LARELGLQPR QVAIWFQNKR ARWKSKQLER DYSTLKSNYD NLASQYESLK 120 KEKQSLLIQL QKLNDVMKKD SIGLESDKRA DAIKKNIEMD GRPSLSFDLS EHGANGVISD 180 DDSCIKPNYL GLNEDTDHHH LLKMVEAGDS SLTSPENWGS LDEDGLLDQQ PSSTTYDQWW 240 DFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61890.1	8e-62	HD-ZIP family protein