PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU09193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YA | ||||||||
Protein Properties | Length: 184aa MW: 20892.3 Da PI: 9.3592 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.9 | 6e-32 | 48 | 102 | 3 | 58 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p+YVNaKQy++IlkRRq Rakle+++kl k rkpylh+SRh+hA+ R+RgsgGrF PHU09193.1 48 PIYVNAKQYNAILKRRQVRAKLEAQNKL-VKDRKPYLHDSRHRHAMERARGSGGRF 102 9***************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
ACVSYPWADS YFGRLISTYE SNAINYPQRA GVTSTRVALP LDCTESLPIY VNAKQYNAIL 60 KRRQVRAKLE AQNKLVKDRK PYLHDSRHRH AMERARGSGG RFLNTENMQQ SNPSSPKHDK 120 NIFKQQAGAM VQHSESGSWG TSTQSGSDVT SIFNDDDMFR QPEFRVSGFP FHMQEAEDFM 180 HVGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14020.1 | 3e-40 | NF-YA family protein |