PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08920.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 172aa    MW: 20178.2 Da    PI: 9.5531
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.2e-151395499
                E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       +k+g l +p  f++  +g+   +++ ++  + g+ W vk+     +++  +++GW  Fv++++L+ gD++vF+++g++ef   v++f++
  PHU08920.1 13 PI--QPGFKNG-LKIPVGFLKYVKGQ--DQIEHVVLRSGGKNWLVKV-----KCWQ-FEAGWAAFVEQHDLQLGDMLVFRYEGNMEF--EVSIFDS 95
                44..4556665.********555766..5578888899*********.....4443.789***********************9999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MKIPPKKPHF FKPIQPGFKN GLKIPVGFLK YVKGQDQIEH VVLRSGGKNW LVKVKCWQFE  60
AGWAAFVEQH DLQLGDMLVF RYEGNMEFEV SIFDSTHCDR EYVEYLQEDQ GGSWRDEEIS  120
KKFKFKGRPR LRIKLSKKAS SHVEAAAHHK SFGHSHFECT IREYNISHHY LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-17B3 family protein