PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08821.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 279aa    MW: 32045.5 Da    PI: 8.684
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3452e-141095199
                EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                ffk l     +k+g l +p  f+ ++ +g+   +++  +  +  + W vk+  ++++    +++GW  Fv++++L+ gD ++F+++g++ef  +v++f++
  PHU08821.1 10 FFKPL--QKGFKHG-LKIPTGFL-KYlKGQ--DQIEHAVLRKGVKNWLVKV--NGGR----FEAGWAAFVEEHDLQLGDLLIFRHEGDMEF--KVSIFDS 95
                56666..5555555.********.554666..567888899999*******..8887....9***********************999999..9*99987 PP
2B352.21.1e-16166244788
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 + + l ++ lv+p kf  ++g+++++  +l+++de+ rsW+vkl  r +++r+ +++GW eF +an Lk gD ++F+++++ 
  PHU08821.1 166 RRYCLVNDFLVIPTKFELANGLSNKR-CDLIIRDERERSWNVKL--RSSGNRVCIRGGWDEFRDANFLKKGDCIMFEVVSNG 244
                 556677899*******9999877544.59***************..*******************************87753 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MKIPPKKPHF FKPLQKGFKH GLKIPTGFLK YLKGQDQIEH AVLRKGVKNW LVKVNGGRFE  60
AGWAAFVEEH DLQLGDLLIF RHEGDMEFKV SIFDSSHCNR EYAEYLQEEE GSDNVEEISK  120
NFKLKDAGTH NPCDQSHFEC TVKPYCISNA SNHKPFGQSH FVCIVRRYCL VNDFLVIPTK  180
FELANGLSNK RCDLIIRDER ERSWNVKLRS SGNRVCIRGG WDEFRDANFL KKGDCIMFEV  240
VSNGNTPIWK YNGKFWGGCQ TSQKTLTKQY EAVGDGKGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-30B3 family protein