PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU08820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 185aa MW: 21911.3 Da PI: 4.2659 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.4 | 2e-16 | 15 | 95 | 8 | 99 |
-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+g l +p f+ ++ +g +++ ++ + g++W vkl ++++ l++GW++Fv++++L+ gD+++F+++g+++f v++f++ PHU08820.1 15 LPGFKNG-LKIPIGFL-KYlKGH--DHIEHVVLKRAGNKWLVKL--NGRR----LEDGWEKFVEEHDLQLGDMLIFRHEGDMDF--DVSIFDS 95 4566666.********.664555..567899999**********..8888....******************************..9999986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MEIPPKKAHF FKPILPGFKN GLKIPIGFLK YLKGHDHIEH VVLKRAGNKW LVKLNGRRLE 60 DGWEKFVEEH DLQLGDMLIF RHEGDMDFDV SIFDSTHCDT EYAEYKQIQE EKDKRVEHEN 120 EDDEVVEDEN DEEEEQEEDD DDDEDDEVYT LDRPFGRSHF EFTIRQYCLS KGFMMDGENS 180 VLIIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31690.1 | 3e-26 | B3 family protein |