PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08817.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 362aa MW: 41784.5 Da PI: 4.6444

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.3	5.1e-17	216	301	5	95
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++++++l++ l++pk+fa+e+ ++ ++ +++ + rsW++ + +++ +++++GW eF+ n LkegD ++F+++++ ++++ ++ PHU08817.1 216 TIKPYSLSKYFLCIPKRFAQENRLIDRKC-NIIMS-DKQRSWTFSV--YTSGEITYFGRGWHEFCITNCLKEGDRLMFEMISN-GETPILR 301 56899999999*********8886654.56655.599***..888889***********************9985.4445555 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MNGRRLEDGW EKFAEEHDLR LGDMLIFRHE GDMDFDVSIF DSTHCDTEYA EYMQIQKEKE 60 KEVEDENENE VVEDENDDED DDNDDDDGEE EDKNENDDTE EERGDDECEE AATHDRPFGR 120 SHFEFTIRQY CLSRGFMTVN ITPKPQAAAS TSADANLILM VKGSHPSHLT VPLDIREVGI 180 RRRKKPKPKI KTSGKAFSNV EATMDMHLSR SQFICTIKPY SLSKYFLCIP KRFAQENRLI 240 DRKCNIIMSD KQRSWTFSVY TSGEITYFGR GWHEFCITNC LKEGDRLMFE MISNGETPIL 300 RFHDLRGSPS LQAEVKMKKL DAERMSDKGL RLKISSTPTP ESQLAASEHA YSRITSGCFN 360 IC

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MNGRRLEDGW EKFAEEHDLR LGDMLIFRHE GDMDFDVSIF DSTHCDTEYA EYMQIQKEKE  60
KEVEDENENE VVEDENDDED DDNDDDDGEE EDKNENDDTE EERGDDECEE AATHDRPFGR  120
SHFEFTIRQY CLSRGFMTVN ITPKPQAAAS TSADANLILM VKGSHPSHLT VPLDIREVGI  180
RRRKKPKPKI KTSGKAFSNV EATMDMHLSR SQFICTIKPY SLSKYFLCIP KRFAQENRLI  240
DRKCNIIMSD KQRSWTFSVY TSGEITYFGR GWHEFCITNC LKEGDRLMFE MISNGETPIL  300
RFHDLRGSPS LQAEVKMKKL DAERMSDKGL RLKISSTPTP ESQLAASEHA YSRITSGCFN  360
IC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	8e-13	B3 family protein