PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 255aa MW: 28804.8 Da PI: 9.6712 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.5 | 4.9e-27 | 105 | 166 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+ +prsYYrC + gC ++k+v+rs++dp++ eitY+++H+++ PHU08488.1 105 LDDGYSWRKYGQKDILGAYYPRSYYRCRYWllrGCAATKQVQRSNDDPTISEITYKDTHTCR 166 59**************************97788***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEHTKQLRTY LSSVSSTSES TPNLLLQKIL SSYEQSLLIL KRTGSTGGAN KPPPASDNRS 60 HRGDDKKRSF KDHPELIDIP KKRKSQPRWT QQVNVRTESG FEGPLDDGYS WRKYGQKDIL 120 GAYYPRSYYR CRYWLLRGCA ATKQVQRSND DPTISEITYK DTHTCREVTN SALQPKSPEK 180 QANHQGYSPS FASPAATESN YLSVSGSQMN SFGRVHNSNH SKSYLSDIGI IQNLYHSDSD 240 RTYTLSANTS TTSFD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 84 | KKRSFKDHPELIDIPKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 2e-37 | WRKY family protein |