PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08360.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 313aa    MW: 35911.2 Da    PI: 6.5693
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.3e-49111391128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eel+++yL+kk++++k++l +vi+evd++k+ePwd+++k+k     +++wy Fs++dkky+tg+r+nrat++g+Wkatg+dk ++  k
  PHU08360.1  11 VPPGFRFHPTEEELLHYYLRKKIANDKIDL-DVIREVDLNKMEPWDIQEKCKIgstPQNDWYLFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYG-K 107
                 69****************************.9***************964444222455*************************************9.7 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +g++ktLvfy+grap+g k dW+mheyrl
  PHU08360.1 108 CKRIGMRKTLVFYRGRAPHGLKLDWIMHEYRL 139
                 789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MNLTVNGQSQ VPPGFRFHPT EEELLHYYLR KKIANDKIDL DVIREVDLNK MEPWDIQEKC  60
KIGSTPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYGKCKR IGMRKTLVFY  120
RGRAPHGLKL DWIMHEYRLD DNSSTQDHQA DVNFCASESG GVEEGWVVCR VFKKKSSLEI  180
PQSSSSTVQK PNTDGVLDQI LMYMGRSSCK QQQQHETKNN NPNIQFESSF LHLPELVNHH  240
HPTTNNDMEV LIHQDCSFDE MLMSTGTDQI NSPACDWLAL DRLVASQLNG HFDIPTNNNT  300
ARSNDDDGTE FWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.11e-101NAC family protein